PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g10970
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 116aa    MW: 13158.9 Da    PI: 9.5301
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g10970genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66e-054793454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h+ +Er R ++i + +  L +l+P +    +k   K  +L + ++Y++  
  CA03g10970 47 SHSSAERVRKEKISEQMGFLHDLVPGC----NKITGKEGMLDEIINYVQFF 93
                89************************9....899*************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-1241104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-1243104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.3354393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MLLQEIPNNS NNSKENSDTT KEKSKITEDK KPDYIHVKAR RGQATDSHSS AERVRKEKIS  60
EQMGFLHDLV PGCNKITGKE GMLDEIINYV QFFQRQIEVK KNKKQLSGIA FAHVD*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004230908.11e-46PREDICTED: transcription factor bHLH63-like isoform X2
RefseqXP_010315306.12e-46PREDICTED: transcription factor bHLH63-like isoform X1
SwissprotQ9ZPW32e-38HBI1_ARATH; Transcription factor HBI1
TrEMBLK4B3I31e-46K4B3I3_SOLLC; Uncharacterized protein
STRINGSolyc01g109700.2.13e-46(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.11e-39bHLH family protein